Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 HBZP1-201ENST00000354915 429 ntBASIC12.22□□□□□ -0.45
MRPL54Q6P161 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 HMGA1P5-201ENST00000412453 271 ntBASIC12.22□□□□□ -0.45
MRPL54Q6P161 ACTG1P4-201ENST00000425123 1122 ntBASIC12.22□□□□□ -0.45
MRPL54Q6P161 ECEL1P3-201ENST00000427961 737 ntBASIC12.22□□□□□ -0.45
MRPL54Q6P161 AC012618.2-201ENST00000428058 849 ntBASIC12.22□□□□□ -0.45
MRPL54Q6P161 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 NUS1P1-201ENST00000446295 882 ntBASIC12.22□□□□□ -0.45
MRPL54Q6P161 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL54Q6P161 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL54Q6P161 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 AC041040.2-201ENST00000622926 2899 ntBASIC12.21□□□□□ -0.45
MRPL54Q6P161 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 AC107918.4-201ENST00000641966 3141 ntBASIC12.21□□□□□ -0.45
MRPL54Q6P161 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 AC233702.5-201ENST00000584107 538 ntBASIC12.21□□□□□ -0.45
MRPL54Q6P161 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 AC073592.5-201ENST00000624854 528 ntBASIC12.21□□□□□ -0.45
MRPL54Q6P161 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL54Q6P161 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.21□□□□□ -0.45
MRPL54Q6P161 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
MRPL54Q6P161 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
MRPL54Q6P161 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MRPL54Q6P161 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MRPL54Q6P161 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
MRPL54Q6P161 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
MRPL54Q6P161 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MRPL54Q6P161 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
MRPL54Q6P161 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms