Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 AC093520.2-201ENST00000561830 333 ntBASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDSS1Q5T2R2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 AL589702.1-201ENST00000641229 1509 ntBASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 FAM58DP-201ENST00000428076 619 ntBASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 CNN2P2-201ENST00000443536 909 ntBASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 CNN2P3-201ENST00000450201 906 ntBASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 AL512356.2-201ENST00000546955 174 ntBASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 AL136317.3-201ENST00000618497 906 ntBASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.68□□□□□ -0.06
PDSS1Q5T2R2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 AC099063.4-201ENST00000641099 1602 ntBASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 AL353705.2-201ENST00000428243 662 ntBASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.67□□□□□ -0.06
PDSS1Q5T2R2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms