Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDE1AP54750 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDE1AP54750 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PDE1AP54750 CROCCP1-201ENST00000426910 5675 ntBASIC19.58■□□□□ 0.73
PDE1AP54750 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDE1AP54750 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDE1AP54750 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDE1AP54750 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDE1AP54750 AL139400.1-201ENST00000366220 510 ntBASIC19.58■□□□□ 0.72
PDE1AP54750 MIR1233-2-201ENST00000408138 82 ntBASIC19.58■□□□□ 0.72
PDE1AP54750 MIR1233-1-201ENST00000408722 82 ntBASIC19.58■□□□□ 0.72
PDE1AP54750 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.58■□□□□ 0.72
PDE1AP54750 HLA-J-203ENST00000494367 1087 ntBASIC19.58■□□□□ 0.72
PDE1AP54750 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.58■□□□□ 0.72
PDE1AP54750 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.58■□□□□ 0.72
PDE1AP54750 SNHG9-202ENST00000564014 471 ntBASIC19.58■□□□□ 0.72
PDE1AP54750 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.58■□□□□ 0.72
PDE1AP54750 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.58■□□□□ 0.72
PDE1AP54750 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.58■□□□□ 0.72
PDE1AP54750 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.58■□□□□ 0.72
PDE1AP54750 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PDE1AP54750 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDE1AP54750 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.58■□□□□ 0.72
PDE1AP54750 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDE1AP54750 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDE1AP54750 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.58■□□□□ 0.72
PDE1AP54750 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PDE1AP54750 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDE1AP54750 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.58■□□□□ 0.72
PDE1AP54750 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.58■□□□□ 0.72
PDE1AP54750 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
PDE1AP54750 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDE1AP54750 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDE1AP54750 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.57■□□□□ 0.72
PDE1AP54750 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.57■□□□□ 0.72
PDE1AP54750 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.57■□□□□ 0.72
PDE1AP54750 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.57■□□□□ 0.72
PDE1AP54750 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDE1AP54750 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDE1AP54750 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.57■□□□□ 0.72
PDE1AP54750 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 SPDYE17-201ENST00000412399 783 ntBASIC19.57■□□□□ 0.72
PDE1AP54750 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.57■□□□□ 0.72
PDE1AP54750 PHKG1P2-201ENST00000457537 863 ntBASIC19.57■□□□□ 0.72
PDE1AP54750 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.57■□□□□ 0.72
PDE1AP54750 AC109322.1-201ENST00000524499 1264 ntBASIC19.57■□□□□ 0.72
PDE1AP54750 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.57■□□□□ 0.72
PDE1AP54750 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 RN7SL828P-201ENST00000607615 303 ntBASIC19.57■□□□□ 0.72
PDE1AP54750 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.57■□□□□ 0.72
PDE1AP54750 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.57■□□□□ 0.72
PDE1AP54750 AC092127.1-201ENST00000567093 3455 ntBASIC19.57■□□□□ 0.72
PDE1AP54750 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE1AP54750 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.57■□□□□ 0.72
PDE1AP54750 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDE1AP54750 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDE1AP54750 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.56■□□□□ 0.72
PDE1AP54750 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PDE1AP54750 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.56■□□□□ 0.72
PDE1AP54750 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.56■□□□□ 0.72
PDE1AP54750 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.56■□□□□ 0.72
PDE1AP54750 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.56■□□□□ 0.72
PDE1AP54750 AL450472.2-201ENST00000603663 1156 ntBASIC19.56■□□□□ 0.72
PDE1AP54750 MIR6080-201ENST00000617359 66 ntBASIC19.56■□□□□ 0.72
PDE1AP54750 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.56■□□□□ 0.72
PDE1AP54750 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.56■□□□□ 0.72
PDE1AP54750 AC020658.6-201ENST00000623564 1870 ntBASIC19.56■□□□□ 0.72
PDE1AP54750 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE1AP54750 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
PDE1AP54750 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms