Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARCN1P48444 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARCN1P48444 FAM220BP-201ENST00000377689 816 ntBASIC16.12■□□□□ 0.17
ARCN1P48444 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.12■□□□□ 0.17
ARCN1P48444 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.12■□□□□ 0.17
ARCN1P48444 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.12■□□□□ 0.17
ARCN1P48444 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.12■□□□□ 0.17
ARCN1P48444 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.12■□□□□ 0.17
ARCN1P48444 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.12■□□□□ 0.17
ARCN1P48444 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARCN1P48444 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.12■□□□□ 0.17
ARCN1P48444 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.12■□□□□ 0.17
ARCN1P48444 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.12■□□□□ 0.17
ARCN1P48444 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.12■□□□□ 0.17
ARCN1P48444 AC084121.4-201ENST00000641598 221 ntBASIC16.12■□□□□ 0.17
ARCN1P48444 AF228730.8-201ENST00000642140 221 ntBASIC16.12■□□□□ 0.17
ARCN1P48444 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ARCN1P48444 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.12■□□□□ 0.17
ARCN1P48444 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARCN1P48444 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ARCN1P48444 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARCN1P48444 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARCN1P48444 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.12■□□□□ 0.17
ARCN1P48444 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARCN1P48444 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARCN1P48444 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.12■□□□□ 0.17
ARCN1P48444 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARCN1P48444 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARCN1P48444 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARCN1P48444 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ARCN1P48444 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARCN1P48444 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.12■□□□□ 0.17
ARCN1P48444 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ARCN1P48444 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ARCN1P48444 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.12■□□□□ 0.17
ARCN1P48444 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARCN1P48444 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARCN1P48444 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.11■□□□□ 0.17
ARCN1P48444 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ARCN1P48444 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARCN1P48444 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.11■□□□□ 0.17
ARCN1P48444 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 AP003680.1-201ENST00000598970 3660 ntBASIC16.11■□□□□ 0.17
ARCN1P48444 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.11■□□□□ 0.17
ARCN1P48444 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ARCN1P48444 AC092850.2-201ENST00000623821 2697 ntBASIC16.11■□□□□ 0.17
ARCN1P48444 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.11■□□□□ 0.17
ARCN1P48444 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.11■□□□□ 0.17
ARCN1P48444 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.11■□□□□ 0.17
ARCN1P48444 AP000344.2-201ENST00000512987 629 ntBASIC16.11■□□□□ 0.17
ARCN1P48444 AC104640.1-201ENST00000562617 2109 ntBASIC16.11■□□□□ 0.17
ARCN1P48444 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 AC004835.2-201ENST00000603762 682 ntBASIC16.11■□□□□ 0.17
ARCN1P48444 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.11■□□□□ 0.17
ARCN1P48444 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ARCN1P48444 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARCN1P48444 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.11■□□□□ 0.17
ARCN1P48444 KRT18P28-201ENST00000453838 1332 ntBASIC16.11■□□□□ 0.17
ARCN1P48444 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.11■□□□□ 0.17
ARCN1P48444 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.11■□□□□ 0.17
ARCN1P48444 AC126177.1-201ENST00000547829 2218 ntBASIC16.11■□□□□ 0.17
ARCN1P48444 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARCN1P48444 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ARCN1P48444 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.1■□□□□ 0.17
ARCN1P48444 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARCN1P48444 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARCN1P48444 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARCN1P48444 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARCN1P48444 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARCN1P48444 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARCN1P48444 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARCN1P48444 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.1■□□□□ 0.17
ARCN1P48444 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.1■□□□□ 0.17
ARCN1P48444 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.1■□□□□ 0.17
ARCN1P48444 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARCN1P48444 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARCN1P48444 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.1■□□□□ 0.17
ARCN1P48444 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARCN1P48444 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.1■□□□□ 0.17
ARCN1P48444 AC005237.2-201ENST00000434368 219 ntBASIC16.1■□□□□ 0.17
ARCN1P48444 AL592309.1-201ENST00000443127 649 ntBASIC16.1■□□□□ 0.17
ARCN1P48444 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.1■□□□□ 0.17
ARCN1P48444 KRT8P23-201ENST00000560090 1207 ntBASIC16.1■□□□□ 0.17
ARCN1P48444 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.1■□□□□ 0.17
ARCN1P48444 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.1■□□□□ 0.17
ARCN1P48444 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.1■□□□□ 0.17
ARCN1P48444 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms