Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 Z97205.2-201ENST00000564697 1639 ntBASIC17.7■□□□□ 0.42
RFC5P40937 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.7■□□□□ 0.42
RFC5P40937 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RFC5P40937 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC5P40937 AL035633.1-201ENST00000406139 838 ntBASIC17.7■□□□□ 0.42
RFC5P40937 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC5P40937 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.7■□□□□ 0.42
RFC5P40937 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC5P40937 AC104794.3-201ENST00000566840 1248 ntBASIC17.7■□□□□ 0.42
RFC5P40937 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RFC5P40937 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
RFC5P40937 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC5P40937 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.7■□□□□ 0.42
RFC5P40937 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.7■□□□□ 0.42
RFC5P40937 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC5P40937 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.7■□□□□ 0.42
RFC5P40937 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.7■□□□□ 0.42
RFC5P40937 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC5P40937 MST1L-201ENST00000442552 2185 ntBASIC17.7■□□□□ 0.42
RFC5P40937 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC5P40937 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC5P40937 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC5P40937 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC5P40937 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC5P40937 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC5P40937 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC5P40937 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC5P40937 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RFC5P40937 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.69■□□□□ 0.42
RFC5P40937 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RFC5P40937 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.69■□□□□ 0.42
RFC5P40937 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RFC5P40937 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.69■□□□□ 0.42
RFC5P40937 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.69■□□□□ 0.42
RFC5P40937 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.69■□□□□ 0.42
RFC5P40937 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 PIN1P1-201ENST00000412108 996 ntBASIC17.69■□□□□ 0.42
RFC5P40937 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.69■□□□□ 0.42
RFC5P40937 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.69■□□□□ 0.42
RFC5P40937 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.69■□□□□ 0.42
RFC5P40937 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.69■□□□□ 0.42
RFC5P40937 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 AC004461.2-201ENST00000629517 803 ntBASIC17.69■□□□□ 0.42
RFC5P40937 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 REXO1L1P-202ENST00000608646 1974 ntBASIC17.69■□□□□ 0.42
RFC5P40937 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.69■□□□□ 0.42
RFC5P40937 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RFC5P40937 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RFC5P40937 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
RFC5P40937 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RFC5P40937 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RFC5P40937 AC068418.2-201ENST00000577309 3703 ntBASIC17.69■□□□□ 0.42
RFC5P40937 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC5P40937 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
RFC5P40937 AC006449.5-201ENST00000610658 2098 ntBASIC17.68■□□□□ 0.42
RFC5P40937 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.68■□□□□ 0.42
RFC5P40937 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
RFC5P40937 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RFC5P40937 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RFC5P40937 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.68■□□□□ 0.42
RFC5P40937 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.68■□□□□ 0.42
RFC5P40937 PHKG1P2-201ENST00000457537 863 ntBASIC17.68■□□□□ 0.42
RFC5P40937 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.68■□□□□ 0.42
RFC5P40937 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.68■□□□□ 0.42
RFC5P40937 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC5P40937 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC5P40937 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.68■□□□□ 0.42
RFC5P40937 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.68■□□□□ 0.42
RFC5P40937 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.68■□□□□ 0.42
RFC5P40937 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RFC5P40937 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms