Protein–RNA interactions for Protein: P32302

CXCR5, C-X-C chemokine receptor type 5, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR5P32302 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CXCR5P32302 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.04■□□□□ 0.32
CXCR5P32302 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 AC108073.2-201ENST00000464002 357 ntBASIC17.04■□□□□ 0.32
CXCR5P32302 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.04■□□□□ 0.32
CXCR5P32302 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.04■□□□□ 0.32
CXCR5P32302 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.04■□□□□ 0.32
CXCR5P32302 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.04■□□□□ 0.32
CXCR5P32302 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CXCR5P32302 AL445228.2-201ENST00000605589 952 ntBASIC17.04■□□□□ 0.32
CXCR5P32302 MIR1199-201ENST00000621445 119 ntBASIC17.04■□□□□ 0.32
CXCR5P32302 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CXCR5P32302 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.04■□□□□ 0.32
CXCR5P32302 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.04■□□□□ 0.32
CXCR5P32302 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 AC067930.6-201ENST00000623257 4947 ntBASIC17.04■□□□□ 0.32
CXCR5P32302 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.04■□□□□ 0.32
CXCR5P32302 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CXCR5P32302 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.04■□□□□ 0.32
CXCR5P32302 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CXCR5P32302 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.03■□□□□ 0.32
CXCR5P32302 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.03■□□□□ 0.32
CXCR5P32302 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.03■□□□□ 0.32
CXCR5P32302 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.03■□□□□ 0.32
CXCR5P32302 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CXCR5P32302 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CXCR5P32302 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.03■□□□□ 0.32
CXCR5P32302 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.03■□□□□ 0.32
CXCR5P32302 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.03■□□□□ 0.32
CXCR5P32302 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.03■□□□□ 0.32
CXCR5P32302 AC012640.2-201ENST00000561606 901 ntBASIC17.03■□□□□ 0.32
CXCR5P32302 PRELID1P1-202ENST00000567272 903 ntBASIC17.03■□□□□ 0.32
CXCR5P32302 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.03■□□□□ 0.32
CXCR5P32302 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.03■□□□□ 0.32
CXCR5P32302 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CXCR5P32302 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CXCR5P32302 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CXCR5P32302 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CXCR5P32302 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXCR5P32302 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.02■□□□□ 0.32
CXCR5P32302 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CXCR5P32302 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.02■□□□□ 0.32
CXCR5P32302 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXCR5P32302 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXCR5P32302 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CXCR5P32302 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXCR5P32302 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXCR5P32302 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXCR5P32302 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXCR5P32302 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXCR5P32302 AC007686.3-201ENST00000619017 3487 ntBASIC17.02■□□□□ 0.32
CXCR5P32302 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.02■□□□□ 0.32
CXCR5P32302 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms