Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.26□□□□□ -0.13
MSR1P21757 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.26□□□□□ -0.13
MSR1P21757 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.26□□□□□ -0.13
MSR1P21757 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.26□□□□□ -0.13
MSR1P21757 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 AP000842.3-202ENST00000569238 1080 ntBASIC14.26□□□□□ -0.13
MSR1P21757 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.26□□□□□ -0.13
MSR1P21757 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.26□□□□□ -0.13
MSR1P21757 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.26□□□□□ -0.13
MSR1P21757 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
MSR1P21757 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
MSR1P21757 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 FOXO1B-201ENST00000504678 1527 ntBASIC14.25□□□□□ -0.13
MSR1P21757 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 AP001282.1-201ENST00000531301 1499 ntBASIC14.25□□□□□ -0.13
MSR1P21757 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
MSR1P21757 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MSR1P21757 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
MSR1P21757 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MSR1P21757 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
MSR1P21757 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MSR1P21757 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MSR1P21757 CEND1P1-201ENST00000451006 455 ntBASIC14.25□□□□□ -0.13
MSR1P21757 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.25□□□□□ -0.13
MSR1P21757 RNA5SP410-201ENST00000516285 106 ntBASIC14.25□□□□□ -0.13
MSR1P21757 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.25□□□□□ -0.13
MSR1P21757 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.25□□□□□ -0.13
MSR1P21757 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.25□□□□□ -0.13
MSR1P21757 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.25□□□□□ -0.13
MSR1P21757 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.25□□□□□ -0.13
MSR1P21757 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.25□□□□□ -0.13
MSR1P21757 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MSR1P21757 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.25□□□□□ -0.13
MSR1P21757 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.25□□□□□ -0.13
MSR1P21757 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.24□□□□□ -0.13
MSR1P21757 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.24□□□□□ -0.13
MSR1P21757 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
MSR1P21757 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.24□□□□□ -0.13
MSR1P21757 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.24□□□□□ -0.13
MSR1P21757 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 MIR346-201ENST00000362234 95 ntBASIC14.24□□□□□ -0.13
MSR1P21757 FAM220BP-201ENST00000377689 816 ntBASIC14.24□□□□□ -0.13
MSR1P21757 HLA-H-201ENST00000383620 1096 ntBASIC14.24□□□□□ -0.13
MSR1P21757 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.24□□□□□ -0.13
MSR1P21757 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.24□□□□□ -0.13
MSR1P21757 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 GPX1P2-201ENST00000429271 606 ntBASIC14.24□□□□□ -0.13
MSR1P21757 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.24□□□□□ -0.13
MSR1P21757 AL592309.1-201ENST00000443127 649 ntBASIC14.24□□□□□ -0.13
MSR1P21757 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
MSR1P21757 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.24□□□□□ -0.13
MSR1P21757 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.24□□□□□ -0.13
MSR1P21757 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms