Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.69■□□□□ 0.42
EPB41P11171 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPB41P11171 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPB41P11171 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.69■□□□□ 0.42
EPB41P11171 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.69■□□□□ 0.42
EPB41P11171 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
EPB41P11171 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.69■□□□□ 0.42
EPB41P11171 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPB41P11171 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.69■□□□□ 0.42
EPB41P11171 GPX1P2-201ENST00000429271 606 ntBASIC17.69■□□□□ 0.42
EPB41P11171 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.69■□□□□ 0.42
EPB41P11171 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.69■□□□□ 0.42
EPB41P11171 KRT8P23-201ENST00000560090 1207 ntBASIC17.69■□□□□ 0.42
EPB41P11171 AP000842.3-202ENST00000569238 1080 ntBASIC17.69■□□□□ 0.42
EPB41P11171 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.69■□□□□ 0.42
EPB41P11171 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.69■□□□□ 0.42
EPB41P11171 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.69■□□□□ 0.42
EPB41P11171 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.69■□□□□ 0.42
EPB41P11171 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPB41P11171 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
EPB41P11171 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPB41P11171 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.69■□□□□ 0.42
EPB41P11171 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EPB41P11171 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPB41P11171 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPB41P11171 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.69■□□□□ 0.42
EPB41P11171 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPB41P11171 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPB41P11171 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.68■□□□□ 0.42
EPB41P11171 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
EPB41P11171 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.68■□□□□ 0.42
EPB41P11171 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.68■□□□□ 0.42
EPB41P11171 RNA5SP410-201ENST00000516285 106 ntBASIC17.68■□□□□ 0.42
EPB41P11171 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.68■□□□□ 0.42
EPB41P11171 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
EPB41P11171 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.68■□□□□ 0.42
EPB41P11171 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 ELL2P1-201ENST00000413990 1906 ntBASIC17.68■□□□□ 0.42
EPB41P11171 AC099063.4-201ENST00000641099 1602 ntBASIC17.68■□□□□ 0.42
EPB41P11171 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.68■□□□□ 0.42
EPB41P11171 AP001282.1-201ENST00000531301 1499 ntBASIC17.68■□□□□ 0.42
EPB41P11171 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.68■□□□□ 0.42
EPB41P11171 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPB41P11171 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
EPB41P11171 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
EPB41P11171 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPB41P11171 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPB41P11171 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPB41P11171 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
EPB41P11171 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPB41P11171 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPB41P11171 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.67■□□□□ 0.42
EPB41P11171 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPB41P11171 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
EPB41P11171 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPB41P11171 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPB41P11171 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.67■□□□□ 0.42
EPB41P11171 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.67■□□□□ 0.42
EPB41P11171 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.67■□□□□ 0.42
EPB41P11171 LINC01225-203ENST00000563550 1244 ntBASIC17.67■□□□□ 0.42
EPB41P11171 AC005829.1-201ENST00000570002 483 ntBASIC17.67■□□□□ 0.42
EPB41P11171 AC061975.2-201ENST00000581722 295 ntBASIC17.67■□□□□ 0.42
EPB41P11171 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
EPB41P11171 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPB41P11171 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.67■□□□□ 0.42
EPB41P11171 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPB41P11171 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPB41P11171 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.67■□□□□ 0.42
EPB41P11171 AC068418.2-201ENST00000577309 3703 ntBASIC17.67■□□□□ 0.42
EPB41P11171 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
EPB41P11171 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.66■□□□□ 0.42
EPB41P11171 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
EPB41P11171 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.66■□□□□ 0.42
EPB41P11171 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPB41P11171 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms