Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGN1P05114 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGN1P05114 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HMGN1P05114 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGN1P05114 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HMGN1P05114 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HMGN1P05114 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.62□□□□□ -0.07
HMGN1P05114 AL513480.1-201ENST00000451731 511 ntBASIC14.62□□□□□ -0.07
HMGN1P05114 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGN1P05114 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.62□□□□□ -0.07
HMGN1P05114 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGN1P05114 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGN1P05114 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.62□□□□□ -0.07
HMGN1P05114 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.62□□□□□ -0.07
HMGN1P05114 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGN1P05114 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HMGN1P05114 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
HMGN1P05114 AP001282.1-201ENST00000531301 1499 ntBASIC14.62□□□□□ -0.07
HMGN1P05114 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGN1P05114 AL109954.1-202ENST00000564051 2148 ntBASIC14.62□□□□□ -0.07
HMGN1P05114 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGN1P05114 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HMGN1P05114 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGN1P05114 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HMGN1P05114 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGN1P05114 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGN1P05114 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HMGN1P05114 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGN1P05114 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGN1P05114 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGN1P05114 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.61□□□□□ -0.07
HMGN1P05114 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGN1P05114 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGN1P05114 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
HMGN1P05114 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGN1P05114 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGN1P05114 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HMGN1P05114 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HMGN1P05114 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HMGN1P05114 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGN1P05114 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms