Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.9■□□□□ 0.3
APOEP02649 REXO1L8P-201ENST00000604378 1897 ntBASIC16.9■□□□□ 0.3
APOEP02649 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 AL592424.1-201ENST00000563624 1536 ntBASIC16.9■□□□□ 0.3
APOEP02649 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.9■□□□□ 0.3
APOEP02649 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
APOEP02649 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
APOEP02649 AC008677.1-201ENST00000519230 1561 ntBASIC16.89■□□□□ 0.3
APOEP02649 AL596087.1-201ENST00000400979 1969 ntBASIC16.89■□□□□ 0.3
APOEP02649 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.89■□□□□ 0.29
APOEP02649 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
APOEP02649 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.89■□□□□ 0.29
APOEP02649 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
APOEP02649 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.89■□□□□ 0.29
APOEP02649 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.89■□□□□ 0.29
APOEP02649 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
APOEP02649 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.89■□□□□ 0.29
APOEP02649 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.89■□□□□ 0.29
APOEP02649 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.89■□□□□ 0.29
APOEP02649 AC125807.1-201ENST00000483097 614 ntBASIC16.89■□□□□ 0.29
APOEP02649 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.89■□□□□ 0.29
APOEP02649 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.89■□□□□ 0.29
APOEP02649 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.89■□□□□ 0.29
APOEP02649 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 AC132872.4-202ENST00000622924 2756 ntBASIC16.89■□□□□ 0.29
APOEP02649 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
APOEP02649 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
APOEP02649 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
APOEP02649 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
APOEP02649 TUBB3P1-201ENST00000405796 1332 ntBASIC16.89■□□□□ 0.29
APOEP02649 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOEP02649 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
APOEP02649 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.88■□□□□ 0.29
APOEP02649 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.88■□□□□ 0.29
APOEP02649 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
APOEP02649 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
APOEP02649 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
APOEP02649 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 AC068418.2-201ENST00000577309 3703 ntBASIC16.88■□□□□ 0.29
APOEP02649 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.88■□□□□ 0.29
APOEP02649 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
APOEP02649 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
APOEP02649 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.88■□□□□ 0.29
APOEP02649 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.88■□□□□ 0.29
APOEP02649 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.88■□□□□ 0.29
APOEP02649 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.88■□□□□ 0.29
APOEP02649 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.88■□□□□ 0.29
APOEP02649 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.88■□□□□ 0.29
APOEP02649 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.88■□□□□ 0.29
APOEP02649 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.88■□□□□ 0.29
APOEP02649 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.88■□□□□ 0.29
APOEP02649 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.88■□□□□ 0.29
APOEP02649 MIR4453-201ENST00000584019 89 ntBASIC16.88■□□□□ 0.29
APOEP02649 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
APOEP02649 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
APOEP02649 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
APOEP02649 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
APOEP02649 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
APOEP02649 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
APOEP02649 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.88■□□□□ 0.29
APOEP02649 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOEP02649 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.88■□□□□ 0.29
APOEP02649 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.87■□□□□ 0.29
APOEP02649 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APOEP02649 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
APOEP02649 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.87■□□□□ 0.29
APOEP02649 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.87■□□□□ 0.29
APOEP02649 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APOEP02649 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.87■□□□□ 0.29
APOEP02649 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.87■□□□□ 0.29
APOEP02649 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms