Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
COL1A1P02452 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.1■□□□□ 0.65
COL1A1P02452 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.1■□□□□ 0.65
COL1A1P02452 MIR4313-201ENST00000580760 101 ntBASIC19.1■□□□□ 0.65
COL1A1P02452 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL1A1P02452 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.1■□□□□ 0.65
COL1A1P02452 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
COL1A1P02452 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.1■□□□□ 0.65
COL1A1P02452 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COL1A1P02452 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.1■□□□□ 0.65
COL1A1P02452 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.1■□□□□ 0.65
COL1A1P02452 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL1A1P02452 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL1A1P02452 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL1A1P02452 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL1A1P02452 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.1■□□□□ 0.65
COL1A1P02452 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.1■□□□□ 0.65
COL1A1P02452 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.1■□□□□ 0.65
COL1A1P02452 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL1A1P02452 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL1A1P02452 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
COL1A1P02452 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.09■□□□□ 0.65
COL1A1P02452 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COL1A1P02452 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.09■□□□□ 0.65
COL1A1P02452 AL355994.2-201ENST00000447882 704 ntBASIC19.09■□□□□ 0.65
COL1A1P02452 KRT18P43-201ENST00000469825 1281 ntBASIC19.09■□□□□ 0.65
COL1A1P02452 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.09■□□□□ 0.65
COL1A1P02452 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.09■□□□□ 0.65
COL1A1P02452 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
COL1A1P02452 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
COL1A1P02452 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COL1A1P02452 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.09■□□□□ 0.65
COL1A1P02452 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.09■□□□□ 0.65
COL1A1P02452 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.09■□□□□ 0.65
COL1A1P02452 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 TUBB1P2-201ENST00000422712 1306 ntBASIC19.09■□□□□ 0.65
COL1A1P02452 TUBB1P1-201ENST00000503144 1300 ntBASIC19.09■□□□□ 0.65
COL1A1P02452 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.09■□□□□ 0.65
COL1A1P02452 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
COL1A1P02452 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 AC079328.2-201ENST00000561241 3354 ntBASIC19.09■□□□□ 0.65
COL1A1P02452 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.09■□□□□ 0.65
COL1A1P02452 PDIA3P1-201ENST00000471856 1510 ntBASIC19.09■□□□□ 0.65
COL1A1P02452 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.09■□□□□ 0.65
COL1A1P02452 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.09■□□□□ 0.65
COL1A1P02452 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.09■□□□□ 0.65
COL1A1P02452 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 AC120045.2-201ENST00000567334 178 ntBASIC19.09■□□□□ 0.65
COL1A1P02452 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.09■□□□□ 0.65
COL1A1P02452 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.09■□□□□ 0.65
COL1A1P02452 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL1A1P02452 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL1A1P02452 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
COL1A1P02452 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.08■□□□□ 0.65
COL1A1P02452 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL1A1P02452 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.08■□□□□ 0.65
COL1A1P02452 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL1A1P02452 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.08■□□□□ 0.65
COL1A1P02452 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
COL1A1P02452 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
COL1A1P02452 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.08■□□□□ 0.64
COL1A1P02452 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
COL1A1P02452 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL1A1P02452 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.08■□□□□ 0.64
COL1A1P02452 MSTO2P-201ENST00000314835 1709 ntBASIC19.08■□□□□ 0.64
COL1A1P02452 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
COL1A1P02452 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.08■□□□□ 0.64
COL1A1P02452 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.08■□□□□ 0.64
COL1A1P02452 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
COL1A1P02452 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.08■□□□□ 0.64
COL1A1P02452 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.08■□□□□ 0.64
COL1A1P02452 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
COL1A1P02452 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL1A1P02452 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
COL1A1P02452 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.08■□□□□ 0.64
COL1A1P02452 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.08■□□□□ 0.64
COL1A1P02452 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.08■□□□□ 0.64
COL1A1P02452 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.08■□□□□ 0.64
COL1A1P02452 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.08■□□□□ 0.64
COL1A1P02452 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL1A1P02452 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.07■□□□□ 0.64
COL1A1P02452 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms