Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.97■□□□□ 0.31
RTN3O95197 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.97■□□□□ 0.31
RTN3O95197 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RTN3O95197 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RTN3O95197 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RTN3O95197 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RTN3O95197 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 PCDHA14-201ENST00000506751 2298 ntBASIC16.96■□□□□ 0.31
RTN3O95197 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.96■□□□□ 0.31
RTN3O95197 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.96■□□□□ 0.31
RTN3O95197 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RTN3O95197 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RTN3O95197 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.96■□□□□ 0.31
RTN3O95197 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 UGT1A2P-201ENST00000454886 866 ntBASIC16.96■□□□□ 0.31
RTN3O95197 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.96■□□□□ 0.31
RTN3O95197 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.96■□□□□ 0.31
RTN3O95197 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
RTN3O95197 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.96■□□□□ 0.31
RTN3O95197 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.96■□□□□ 0.31
RTN3O95197 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RTN3O95197 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RTN3O95197 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RTN3O95197 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RTN3O95197 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN3O95197 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTN3O95197 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.96■□□□□ 0.3
RTN3O95197 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTN3O95197 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTN3O95197 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.96■□□□□ 0.3
RTN3O95197 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTN3O95197 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RTN3O95197 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN3O95197 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RTN3O95197 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
RTN3O95197 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RTN3O95197 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN3O95197 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN3O95197 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.95■□□□□ 0.3
RTN3O95197 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN3O95197 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.95■□□□□ 0.3
RTN3O95197 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
RTN3O95197 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.95■□□□□ 0.3
RTN3O95197 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.95■□□□□ 0.3
RTN3O95197 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.95■□□□□ 0.3
RTN3O95197 AC009477.1-201ENST00000452936 217 ntBASIC16.95■□□□□ 0.3
RTN3O95197 RN7SL618P-201ENST00000477850 296 ntBASIC16.95■□□□□ 0.3
RTN3O95197 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.95■□□□□ 0.3
RTN3O95197 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN3O95197 LINC02084-201ENST00000606069 1096 ntBASIC16.95■□□□□ 0.3
RTN3O95197 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.95■□□□□ 0.3
RTN3O95197 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN3O95197 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.95■□□□□ 0.3
RTN3O95197 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN3O95197 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN3O95197 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN3O95197 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RTN3O95197 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
RTN3O95197 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.94■□□□□ 0.3
RTN3O95197 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTN3O95197 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
RTN3O95197 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.94■□□□□ 0.3
RTN3O95197 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RTN3O95197 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTN3O95197 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTN3O95197 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RTN3O95197 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.94■□□□□ 0.3
RTN3O95197 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms