Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 LINC01225-203ENST00000563550 1244 ntBASIC16.08■□□□□ 0.16
NDUFS3O75489 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.08■□□□□ 0.16
NDUFS3O75489 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.08■□□□□ 0.16
NDUFS3O75489 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NDUFS3O75489 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFS3O75489 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFS3O75489 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.08■□□□□ 0.16
NDUFS3O75489 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFS3O75489 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.08■□□□□ 0.16
NDUFS3O75489 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFS3O75489 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFS3O75489 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFS3O75489 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFS3O75489 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFS3O75489 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.08■□□□□ 0.16
NDUFS3O75489 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.08■□□□□ 0.16
NDUFS3O75489 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
NDUFS3O75489 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
NDUFS3O75489 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NDUFS3O75489 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.07■□□□□ 0.16
NDUFS3O75489 AC126755.1-201ENST00000525846 6405 ntBASIC16.07■□□□□ 0.16
NDUFS3O75489 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.07■□□□□ 0.16
NDUFS3O75489 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
NDUFS3O75489 BX842568.4-201ENST00000421222 227 ntBASIC16.07■□□□□ 0.16
NDUFS3O75489 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.07■□□□□ 0.16
NDUFS3O75489 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NDUFS3O75489 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.07■□□□□ 0.16
NDUFS3O75489 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.07■□□□□ 0.16
NDUFS3O75489 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.07■□□□□ 0.16
NDUFS3O75489 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.07■□□□□ 0.16
NDUFS3O75489 AC061975.2-201ENST00000581722 295 ntBASIC16.07■□□□□ 0.16
NDUFS3O75489 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.07■□□□□ 0.16
NDUFS3O75489 AP001282.1-201ENST00000531301 1499 ntBASIC16.07■□□□□ 0.16
NDUFS3O75489 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NDUFS3O75489 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.07■□□□□ 0.16
NDUFS3O75489 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.07■□□□□ 0.16
NDUFS3O75489 AP005117.1-202ENST00000581724 1908 ntBASIC16.07■□□□□ 0.16
NDUFS3O75489 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
NDUFS3O75489 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.07■□□□□ 0.16
NDUFS3O75489 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFS3O75489 TSPY26P-202ENST00000565928 3884 ntBASIC16.07■□□□□ 0.16
NDUFS3O75489 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.07■□□□□ 0.16
NDUFS3O75489 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 CICP6-201ENST00000457191 2729 ntBASIC16.06■□□□□ 0.16
NDUFS3O75489 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.06■□□□□ 0.16
NDUFS3O75489 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFS3O75489 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFS3O75489 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFS3O75489 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.06■□□□□ 0.16
NDUFS3O75489 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFS3O75489 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFS3O75489 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFS3O75489 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 FAM220BP-201ENST00000377689 816 ntBASIC16.06■□□□□ 0.16
NDUFS3O75489 HLA-H-201ENST00000383620 1096 ntBASIC16.06■□□□□ 0.16
NDUFS3O75489 AC005237.2-201ENST00000434368 219 ntBASIC16.06■□□□□ 0.16
NDUFS3O75489 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.06■□□□□ 0.16
NDUFS3O75489 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFS3O75489 MIR4469-201ENST00000583919 79 ntBASIC16.06■□□□□ 0.16
NDUFS3O75489 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.06■□□□□ 0.16
NDUFS3O75489 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFS3O75489 AC010327.4-202ENST00000591484 748 ntBASIC16.06■□□□□ 0.16
NDUFS3O75489 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.06■□□□□ 0.16
NDUFS3O75489 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NDUFS3O75489 AC105339.1-204ENST00000636249 355 ntBASIC16.06■□□□□ 0.16
NDUFS3O75489 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.06■□□□□ 0.16
NDUFS3O75489 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.06■□□□□ 0.16
NDUFS3O75489 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NDUFS3O75489 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
NDUFS3O75489 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFS3O75489 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFS3O75489 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NDUFS3O75489 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NDUFS3O75489 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms