Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGC3Q9UN70 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 KRT8P12-202ENST00000472924 1397 ntBASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 FO393414.2-201ENST00000405153 598 ntBASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 HIST3H2BA-201ENST00000436555 524 ntBASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 MIR4313-201ENST00000580760 101 ntBASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGC3Q9UN70 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 AL079307.3-201ENST00000556114 283 ntBASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 AC025678.2-201ENST00000562061 970 ntBASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 Z92544.3-201ENST00000624747 417 ntBASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 PAUPAR-201ENST00000630360 2965 ntBASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC3Q9UN70 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 AZGP1P1-201ENST00000411909 902 ntBASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 MTND6P24-201ENST00000440466 518 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms