Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 AC124283.3-201ENST00000570869 594 ntBASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 MIR4313-201ENST00000580760 101 ntBASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNPO2Q9UMS6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SYNPO2Q9UMS6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNPO2Q9UMS6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNPO2Q9UMS6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNPO2Q9UMS6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.33■□□□□ 0.53
SYNPO2Q9UMS6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SYNPO2Q9UMS6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SYNPO2Q9UMS6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNPO2Q9UMS6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
SYNPO2Q9UMS6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.33■□□□□ 0.53
SYNPO2Q9UMS6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SYNPO2Q9UMS6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 ARSEP1-201ENST00000420443 635 ntBASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 CYP2T1P-202ENST00000641596 2535 ntBASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 INTS4P2-202ENST00000614726 2019 ntBASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SYNPO2Q9UMS6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 KRT8P22-201ENST00000562317 1415 ntBASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 AC079776.1-201ENST00000401540 1152 ntBASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 AC134915.1-201ENST00000426461 574 ntBASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 AC015910.1-201ENST00000579400 975 ntBASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 AL359881.2-201ENST00000602973 570 ntBASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 RPSAP52-203ENST00000622976 1023 ntBASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms