Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 MCCD1P2-201ENST00000423228 335 ntBASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 AL513480.1-201ENST00000451731 511 ntBASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 PDPK2P-202ENST00000562415 1191 ntBASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CNOT11Q9UKZ1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT11Q9UKZ1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 AC092919.2-201ENST00000623631 1645 ntBASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 DNAJB3-201ENST00000446806 729 ntBASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 MTDHP5-201ENST00000598980 586 ntBASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT11Q9UKZ1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 SNX18-202ENST00000343017 3140 ntBASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT11Q9UKZ1 RPSAP43-201ENST00000402237 625 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms