Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 AL590627.1-203ENST00000421194 1026 ntBASIC14.27□□□□□ -0.13
DUX4Q9UBX2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 RNA5SP415-201ENST00000517246 115 ntBASIC14.27□□□□□ -0.13
DUX4Q9UBX2 IGHV3-22-201ENST00000520721 359 ntBASIC14.27□□□□□ -0.13
DUX4Q9UBX2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 AL805961.1-202ENST00000641562 540 ntBASIC14.27□□□□□ -0.13
DUX4Q9UBX2 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
DUX4Q9UBX2 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.26□□□□□ -0.13
DUX4Q9UBX2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 AC078925.2-201ENST00000624013 1973 ntBASIC14.26□□□□□ -0.13
DUX4Q9UBX2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 UNC93B6-202ENST00000528242 690 ntBASIC14.26□□□□□ -0.13
DUX4Q9UBX2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 AC005593.1-201ENST00000624894 515 ntBASIC14.26□□□□□ -0.13
DUX4Q9UBX2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.26□□□□□ -0.13
DUX4Q9UBX2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 AC104109.2-201ENST00000602919 1418 ntBASIC14.25□□□□□ -0.13
DUX4Q9UBX2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 AP000347.1-202ENST00000435868 847 ntBASIC14.25□□□□□ -0.13
DUX4Q9UBX2 AC108073.2-201ENST00000464002 357 ntBASIC14.25□□□□□ -0.13
DUX4Q9UBX2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms