Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 AL136982.4-201ENST00000437689 1740 ntBASIC16.09■□□□□ 0.17
MRM3Q9HC36 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 AC004967.1-201ENST00000453589 447 ntBASIC16.09■□□□□ 0.17
MRM3Q9HC36 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 YBX1P5-201ENST00000509441 847 ntBASIC16.09■□□□□ 0.17
MRM3Q9HC36 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 AC005829.1-201ENST00000570002 483 ntBASIC16.09■□□□□ 0.17
MRM3Q9HC36 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 AL596257.1-201ENST00000641463 2694 ntBASIC16.09■□□□□ 0.17
MRM3Q9HC36 PRAL-201ENST00000624952 3286 ntBASIC16.09■□□□□ 0.17
MRM3Q9HC36 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 CYP4F24P-201ENST00000586049 1580 ntBASIC16.09■□□□□ 0.17
MRM3Q9HC36 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 TMBIM7P-203ENST00000641617 1718 ntBASIC16.08■□□□□ 0.17
MRM3Q9HC36 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MRM3Q9HC36 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MRM3Q9HC36 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.08■□□□□ 0.17
MRM3Q9HC36 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MRM3Q9HC36 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.08■□□□□ 0.17
MRM3Q9HC36 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MRM3Q9HC36 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.08■□□□□ 0.17
MRM3Q9HC36 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.08■□□□□ 0.16
MRM3Q9HC36 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 RARRES2P9-201ENST00000565168 469 ntBASIC16.08■□□□□ 0.16
MRM3Q9HC36 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 AC022145.2-201ENST00000598203 171 ntBASIC16.08■□□□□ 0.16
MRM3Q9HC36 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 NFIC-211ENST00000641145 8399 ntBASIC16.08■□□□□ 0.16
MRM3Q9HC36 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
MRM3Q9HC36 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRM3Q9HC36 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms