Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 AL590627.1-203ENST00000421194 1026 ntBASIC14.15□□□□□ -0.14
ELL3Q9HB65 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 AC108751.1-201ENST00000490852 363 ntBASIC14.15□□□□□ -0.14
ELL3Q9HB65 SLC25A1P1-201ENST00000528351 927 ntBASIC14.15□□□□□ -0.14
ELL3Q9HB65 AC107918.2-201ENST00000530817 355 ntBASIC14.15□□□□□ -0.14
ELL3Q9HB65 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 MIR4751-201ENST00000578027 74 ntBASIC14.15□□□□□ -0.14
ELL3Q9HB65 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 AC020765.3-201ENST00000613051 740 ntBASIC14.15□□□□□ -0.14
ELL3Q9HB65 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.15□□□□□ -0.14
ELL3Q9HB65 AL603832.2-201ENST00000566195 2125 ntBASIC14.15□□□□□ -0.14
ELL3Q9HB65 DBET-201ENST00000630918 3363 ntBASIC14.15□□□□□ -0.14
ELL3Q9HB65 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
ELL3Q9HB65 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ELL3Q9HB65 IL9RP2-201ENST00000423948 1312 ntBASIC14.15□□□□□ -0.15
ELL3Q9HB65 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ELL3Q9HB65 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ELL3Q9HB65 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ELL3Q9HB65 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ELL3Q9HB65 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.14□□□□□ -0.15
ELL3Q9HB65 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ELL3Q9HB65 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ELL3Q9HB65 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ELL3Q9HB65 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 IGHV3-65-201ENST00000523210 341 ntBASIC14.14□□□□□ -0.15
ELL3Q9HB65 UNC93B6-202ENST00000528242 690 ntBASIC14.14□□□□□ -0.15
ELL3Q9HB65 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ELL3Q9HB65 AC008667.4-201ENST00000607370 168 ntBASIC14.14□□□□□ -0.15
ELL3Q9HB65 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 AC004790.2-201ENST00000623588 572 ntBASIC14.14□□□□□ -0.15
ELL3Q9HB65 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ELL3Q9HB65 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ELL3Q9HB65 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ELL3Q9HB65 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ELL3Q9HB65 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms