Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 AC241585.1-201ENST00000433527 519 ntBASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 HLA-V-204ENST00000476601 1289 ntBASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 AC061975.2-201ENST00000581722 295 ntBASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 RN7SL828P-201ENST00000607615 303 ntBASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 AL589739.1-201ENST00000607720 493 ntBASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 SPDYE12P-201ENST00000618416 771 ntBASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 AJ011932.1-201ENST00000621707 465 ntBASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 AC132872.4-202ENST00000622924 2756 ntBASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 AC092580.3-201ENST00000430932 139 ntBASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms