Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.83■□□□□ 0.13
NPAS2Q99743 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS2Q99743 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS2Q99743 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS2Q99743 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS2Q99743 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS2Q99743 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NPAS2Q99743 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS2Q99743 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
NPAS2Q99743 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS2Q99743 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
NPAS2Q99743 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS2Q99743 ALG1L5P-201ENST00000482043 771 ntBASIC15.83■□□□□ 0.12
NPAS2Q99743 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS2Q99743 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS2Q99743 MTDHP5-201ENST00000598980 586 ntBASIC15.83■□□□□ 0.12
NPAS2Q99743 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS2Q99743 AC004877.2-201ENST00000623941 599 ntBASIC15.83■□□□□ 0.12
NPAS2Q99743 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS2Q99743 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS2Q99743 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS2Q99743 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NPAS2Q99743 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NPAS2Q99743 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS2Q99743 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS2Q99743 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS2Q99743 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS2Q99743 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS2Q99743 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
NPAS2Q99743 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS2Q99743 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS2Q99743 AC099063.4-201ENST00000641099 1602 ntBASIC15.83■□□□□ 0.12
NPAS2Q99743 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS2Q99743 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS2Q99743 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NPAS2Q99743 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS2Q99743 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 AC136621.1-201ENST00000624017 2304 ntBASIC15.82■□□□□ 0.12
NPAS2Q99743 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NPAS2Q99743 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.82■□□□□ 0.12
NPAS2Q99743 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.82■□□□□ 0.12
NPAS2Q99743 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 AL691403.2-201ENST00000618460 490 ntBASIC15.82■□□□□ 0.12
NPAS2Q99743 REXO1L3P-201ENST00000622202 1288 ntBASIC15.82■□□□□ 0.12
NPAS2Q99743 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NPAS2Q99743 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NPAS2Q99743 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.82■□□□□ 0.12
NPAS2Q99743 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 SSR4P1-203ENST00000599569 2260 ntBASIC15.82■□□□□ 0.12
NPAS2Q99743 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS2Q99743 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS2Q99743 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS2Q99743 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
NPAS2Q99743 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NPAS2Q99743 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS2Q99743 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NPAS2Q99743 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS2Q99743 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
NPAS2Q99743 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms