Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 AK4P3-201ENST00000418260 669 ntBASIC12.26□□□□□ -0.45
AP1S3Q96PC3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 AC011467.2-201ENST00000598425 242 ntBASIC12.26□□□□□ -0.45
AP1S3Q96PC3 HYMAI.1-201ENST00000620949 238 ntBASIC12.26□□□□□ -0.45
AP1S3Q96PC3 AD001527.2-201ENST00000622994 785 ntBASIC12.26□□□□□ -0.45
AP1S3Q96PC3 AL139011.1-202ENST00000642063 584 ntBASIC12.26□□□□□ -0.45
AP1S3Q96PC3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP1S3Q96PC3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 AC015656.1-201ENST00000624209 3578 ntBASIC12.25□□□□□ -0.45
AP1S3Q96PC3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 AC083849.1-201ENST00000615227 514 ntBASIC12.25□□□□□ -0.45
AP1S3Q96PC3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 KRT8P49-201ENST00000604166 1432 ntBASIC12.25□□□□□ -0.45
AP1S3Q96PC3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 AC007686.3-201ENST00000619017 3487 ntBASIC12.25□□□□□ -0.45
AP1S3Q96PC3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP1S3Q96PC3 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms