Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 AC026396.1-201ENST00000419388 421 ntBASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 AL138918.1-201ENST00000568306 659 ntBASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 AC002347.1-201ENST00000569543 541 ntBASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 AL365330.1-201ENST00000607459 531 ntBASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 AC126755.1-201ENST00000525846 6405 ntBASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 DBET-201ENST00000630918 3363 ntBASIC14.3□□□□□ -0.12
LINC00346Q8IVM7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 FAM197Y3-203ENST00000618346 717 ntBASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00346Q8IVM7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms