Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 CR383656.12-201ENST00000549567 513 ntBASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 RRP7BP-205ENST00000566851 833 ntBASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 AC008494.3-201ENST00000606615 944 ntBASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC27A1Q6PCB7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 AC138969.3-201ENST00000546612 1459 ntBASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 AC138932.2-201ENST00000548268 1459 ntBASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 AC126755.4-201ENST00000549796 1459 ntBASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC27A1Q6PCB7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 CU639417.3-201ENST00000624240 1404 ntBASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 AC011477.6-201ENST00000604980 1927 ntBASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 AC098614.1-201ENST00000368528 745 ntBASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 AC136604.1-201ENST00000418535 575 ntBASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC27A1Q6PCB7 HNRNPUP1-201ENST00000554987 333 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms