Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 AC190387.1-201ENST00000551683 408 ntBASIC19.71■□□□□ 0.75
ATP2B3Q16720 AC104794.3-201ENST00000566840 1248 ntBASIC19.71■□□□□ 0.75
ATP2B3Q16720 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 AC004790.1-201ENST00000612686 536 ntBASIC19.71■□□□□ 0.75
ATP2B3Q16720 AL109936.8-201ENST00000641772 604 ntBASIC19.71■□□□□ 0.75
ATP2B3Q16720 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 AC092364.2-201ENST00000596710 2692 ntBASIC19.7■□□□□ 0.74
ATP2B3Q16720 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 AC114501.2-201ENST00000439631 535 ntBASIC19.7■□□□□ 0.74
ATP2B3Q16720 CRB3P1-201ENST00000449338 276 ntBASIC19.7■□□□□ 0.74
ATP2B3Q16720 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 SPDYE18-201ENST00000510091 1050 ntBASIC19.7■□□□□ 0.74
ATP2B3Q16720 SDHAP3-202ENST00000515467 728 ntBASIC19.7■□□□□ 0.74
ATP2B3Q16720 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2B3Q16720 BNIP3P1-202ENST00000550043 1585 ntBASIC19.7■□□□□ 0.74
ATP2B3Q16720 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP2B3Q16720 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 FO393414.2-201ENST00000405153 598 ntBASIC19.69■□□□□ 0.74
ATP2B3Q16720 PIN1P1-201ENST00000412108 996 ntBASIC19.69■□□□□ 0.74
ATP2B3Q16720 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 EEF1DP4-201ENST00000446006 880 ntBASIC19.69■□□□□ 0.74
ATP2B3Q16720 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ATP2B3Q16720 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2B3Q16720 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2B3Q16720 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
ATP2B3Q16720 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP2B3Q16720 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2B3Q16720 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2B3Q16720 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms