Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CHMP24386 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
CHMP24386 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CHMP24386 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CHMP24386 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.12■□□□□ 0.01
CHMP24386 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.12■□□□□ 0.01
CHMP24386 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.12■□□□□ 0.01
CHMP24386 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.12■□□□□ 0.01
CHMP24386 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.12■□□□□ 0.01
CHMP24386 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 SNHG9-202ENST00000564014 471 ntBASIC15.12■□□□□ 0.01
CHMP24386 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.12■□□□□ 0.01
CHMP24386 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.12■□□□□ 0.01
CHMP24386 AL031055.1-201ENST00000606362 631 ntBASIC15.12■□□□□ 0.01
CHMP24386 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CHMP24386 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.12■□□□□ 0.01
CHMP24386 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.12■□□□□ 0.01
CHMP24386 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.12■□□□□ 0.01
CHMP24386 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.12■□□□□ 0.01
CHMP24386 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CHMP24386 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CHMP24386 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.11■□□□□ 0.01
CHMP24386 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.11■□□□□ 0.01
CHMP24386 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.11■□□□□ 0.01
CHMP24386 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CHMP24386 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CHMP24386 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHMP24386 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.11■□□□□ 0.01
CHMP24386 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP24386 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.11■□□□□ 0.01
CHMP24386 AC092474.2-201ENST00000424288 719 ntBASIC15.11■□□□□ 0.01
CHMP24386 RPS8P6-201ENST00000426177 609 ntBASIC15.11■□□□□ 0.01
CHMP24386 DNAJB3-202ENST00000449667 1266 ntBASIC15.11■□□□□ 0.01
CHMP24386 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHMP24386 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP24386 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.11■□□□□ 0.01
CHMP24386 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CHMP24386 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.11■□□□□ 0.01
CHMP24386 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP24386 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP24386 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.11■□□□□ 0.01
CHMP24386 AC006058.4-201ENST00000624016 1670 ntBASIC15.11■□□□□ 0.01
CHMP24386 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHMP24386 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP24386 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.11■□□□□ 0.01
CHMP24386 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP24386 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CHMP24386 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP24386 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP24386 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CHMP24386 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CHMP24386 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP24386 AC069224.1-201ENST00000566372 1715 ntBASIC15.1■□□□□ 0.01
CHMP24386 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms