Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH3P22223 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH3P22223 AC006538.1-201ENST00000567905 1585 ntBASIC15.87■□□□□ 0.13
CDH3P22223 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH3P22223 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH3P22223 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH3P22223 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CDH3P22223 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CDH3P22223 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH3P22223 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDH3P22223 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH3P22223 GPS2P2-201ENST00000430745 888 ntBASIC15.87■□□□□ 0.13
CDH3P22223 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH3P22223 CNN2P2-201ENST00000443536 909 ntBASIC15.87■□□□□ 0.13
CDH3P22223 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDH3P22223 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH3P22223 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.87■□□□□ 0.13
CDH3P22223 CNN2P3-201ENST00000450201 906 ntBASIC15.87■□□□□ 0.13
CDH3P22223 HLA-J-202ENST00000469281 1241 ntBASIC15.87■□□□□ 0.13
CDH3P22223 AC067863.1-201ENST00000494933 530 ntBASIC15.87■□□□□ 0.13
CDH3P22223 ALG1L8P-201ENST00000533887 760 ntBASIC15.87■□□□□ 0.13
CDH3P22223 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH3P22223 AC026150.2-201ENST00000564693 1156 ntBASIC15.87■□□□□ 0.13
CDH3P22223 AL136317.3-201ENST00000618497 906 ntBASIC15.87■□□□□ 0.13
CDH3P22223 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH3P22223 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH3P22223 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH3P22223 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 AC073439.1-201ENST00000624121 1774 ntBASIC15.87■□□□□ 0.13
CDH3P22223 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH3P22223 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH3P22223 AL031731.1-201ENST00000642131 2094 ntBASIC15.87■□□□□ 0.13
CDH3P22223 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CDH3P22223 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDH3P22223 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH3P22223 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDH3P22223 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 GPAA1P2-202ENST00000606848 1787 ntBASIC15.86■□□□□ 0.13
CDH3P22223 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDH3P22223 SPDYE7P-202ENST00000420373 878 ntBASIC15.86■□□□□ 0.13
CDH3P22223 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH3P22223 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH3P22223 AC073389.1-201ENST00000595595 795 ntBASIC15.86■□□□□ 0.13
CDH3P22223 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 MIR6080-201ENST00000617359 66 ntBASIC15.86■□□□□ 0.13
CDH3P22223 AC093512.1-201ENST00000617969 520 ntBASIC15.86■□□□□ 0.13
CDH3P22223 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.86■□□□□ 0.13
CDH3P22223 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CDH3P22223 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH3P22223 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.86■□□□□ 0.13
CDH3P22223 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH3P22223 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH3P22223 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH3P22223 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH3P22223 RNF216P1-203ENST00000404404 2427 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms