Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CD58P19256 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD58P19256 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD58P19256 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD58P19256 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD58P19256 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD58P19256 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD58P19256 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD58P19256 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CD58P19256 AC008677.1-201ENST00000519230 1561 ntBASIC17.32■□□□□ 0.36
CD58P19256 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD58P19256 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.31■□□□□ 0.36
CD58P19256 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CD58P19256 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CD58P19256 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.31■□□□□ 0.36
CD58P19256 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CD58P19256 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CD58P19256 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CD58P19256 HAUS4P1-201ENST00000406739 1145 ntBASIC17.31■□□□□ 0.36
CD58P19256 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.31■□□□□ 0.36
CD58P19256 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 MIR4453-201ENST00000584019 89 ntBASIC17.31■□□□□ 0.36
CD58P19256 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.31■□□□□ 0.36
CD58P19256 Z92544.3-201ENST00000624747 417 ntBASIC17.31■□□□□ 0.36
CD58P19256 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CD58P19256 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.31■□□□□ 0.36
CD58P19256 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CD58P19256 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD58P19256 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CD58P19256 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CD58P19256 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CD58P19256 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.3■□□□□ 0.36
CD58P19256 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 MIR648-201ENST00000385046 94 ntBASIC17.3■□□□□ 0.36
CD58P19256 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.3■□□□□ 0.36
CD58P19256 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.3■□□□□ 0.36
CD58P19256 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.3■□□□□ 0.36
CD58P19256 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.3■□□□□ 0.36
CD58P19256 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.3■□□□□ 0.36
CD58P19256 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.3■□□□□ 0.36
CD58P19256 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD58P19256 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.3■□□□□ 0.36
CD58P19256 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.3■□□□□ 0.36
CD58P19256 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD58P19256 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD58P19256 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD58P19256 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD58P19256 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD58P19256 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CD58P19256 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.29■□□□□ 0.36
CD58P19256 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CD58P19256 AL603832.2-201ENST00000566195 2125 ntBASIC17.29■□□□□ 0.36
CD58P19256 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CD58P19256 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CD58P19256 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD58P19256 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD58P19256 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD58P19256 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CD58P19256 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD58P19256 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD58P19256 AL353705.2-201ENST00000428243 662 ntBASIC17.29■□□□□ 0.36
CD58P19256 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms