Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRBV12-3P01733 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.47□□□□□ -0.41
TRBV12-3P01733 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 MIR648-201ENST00000385046 94 ntBASIC12.46□□□□□ -0.41
TRBV12-3P01733 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 MTND6P24-201ENST00000440466 518 ntBASIC12.46□□□□□ -0.41
TRBV12-3P01733 CNN2P2-201ENST00000443536 909 ntBASIC12.46□□□□□ -0.41
TRBV12-3P01733 CNN2P3-201ENST00000450201 906 ntBASIC12.46□□□□□ -0.41
TRBV12-3P01733 AC245100.5-201ENST00000452108 331 ntBASIC12.46□□□□□ -0.41
TRBV12-3P01733 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 AC105021.1-202ENST00000570572 669 ntBASIC12.46□□□□□ -0.41
TRBV12-3P01733 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 AL136317.3-201ENST00000618497 906 ntBASIC12.46□□□□□ -0.41
TRBV12-3P01733 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TRBV12-3P01733 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRBV12-3P01733 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRBV12-3P01733 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
TRBV12-3P01733 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.46□□□□□ -0.42
TRBV12-3P01733 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
TRBV12-3P01733 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
TRBV12-3P01733 LINC02447-202ENST00000501888 2146 ntBASIC12.46□□□□□ -0.42
TRBV12-3P01733 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRBV12-3P01733 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.46□□□□□ -0.42
TRBV12-3P01733 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 CDC14C-201ENST00000428251 1719 ntBASIC12.45□□□□□ -0.42
TRBV12-3P01733 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 TUBB3P1-201ENST00000405796 1332 ntBASIC12.45□□□□□ -0.42
TRBV12-3P01733 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 PRAL-201ENST00000624952 3286 ntBASIC12.45□□□□□ -0.42
TRBV12-3P01733 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 PMS2P2-201ENST00000425039 1128 ntBASIC12.45□□□□□ -0.42
TRBV12-3P01733 AC125807.1-201ENST00000483097 614 ntBASIC12.45□□□□□ -0.42
TRBV12-3P01733 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.45□□□□□ -0.42
TRBV12-3P01733 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 AC007967.4-201ENST00000614700 386 ntBASIC12.45□□□□□ -0.42
TRBV12-3P01733 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms