Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC024267.1-201ENST00000582320 895 ntBASIC16.54■□□□□ 0.24
MT-CO1P00395 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-CO1P00395 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
MT-CO1P00395 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-CO1P00395 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.54■□□□□ 0.24
MT-CO1P00395 RN7SL828P-201ENST00000607615 303 ntBASIC16.54■□□□□ 0.24
MT-CO1P00395 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-CO1P00395 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-CO1P00395 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-CO1P00395 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-CO1P00395 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-CO1P00395 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.54■□□□□ 0.24
MT-CO1P00395 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-CO1P00395 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
MT-CO1P00395 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-CO1P00395 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-CO1P00395 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-CO1P00395 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-CO1P00395 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MT-CO1P00395 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-CO1P00395 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-CO1P00395 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.53■□□□□ 0.24
MT-CO1P00395 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.53■□□□□ 0.24
MT-CO1P00395 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
MT-CO1P00395 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.53■□□□□ 0.24
MT-CO1P00395 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-CO1P00395 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.53■□□□□ 0.24
MT-CO1P00395 MTND6P24-201ENST00000440466 518 ntBASIC16.53■□□□□ 0.24
MT-CO1P00395 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-CO1P00395 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-CO1P00395 SPCS2P1-201ENST00000561636 679 ntBASIC16.53■□□□□ 0.24
MT-CO1P00395 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MT-CO1P00395 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.53■□□□□ 0.24
MT-CO1P00395 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MT-CO1P00395 AL158211.3-201ENST00000607385 239 ntBASIC16.53■□□□□ 0.24
MT-CO1P00395 AL133215.2-201ENST00000609242 977 ntBASIC16.53■□□□□ 0.24
MT-CO1P00395 AL138828.2-201ENST00000615812 383 ntBASIC16.53■□□□□ 0.24
MT-CO1P00395 SPDYE12P-201ENST00000618416 771 ntBASIC16.53■□□□□ 0.24
MT-CO1P00395 AL390754.1-201ENST00000619088 582 ntBASIC16.53■□□□□ 0.24
MT-CO1P00395 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 AL592424.1-201ENST00000563624 1536 ntBASIC16.53■□□□□ 0.24
MT-CO1P00395 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
MT-CO1P00395 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.53■□□□□ 0.24
MT-CO1P00395 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MT-CO1P00395 AL162727.3-201ENST00000635661 2787 ntBASIC16.53■□□□□ 0.24
MT-CO1P00395 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-CO1P00395 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MT-CO1P00395 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MT-CO1P00395 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-CO1P00395 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-CO1P00395 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MT-CO1P00395 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.53■□□□□ 0.24
MT-CO1P00395 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-CO1P00395 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
MT-CO1P00395 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.52■□□□□ 0.24
MT-CO1P00395 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.52■□□□□ 0.24
MT-CO1P00395 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MT-CO1P00395 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
MT-CO1P00395 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.52■□□□□ 0.24
MT-CO1P00395 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.52■□□□□ 0.24
MT-CO1P00395 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.52■□□□□ 0.24
MT-CO1P00395 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 BCRP1-201ENST00000444246 691 ntBASIC16.52■□□□□ 0.24
MT-CO1P00395 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.52■□□□□ 0.24
MT-CO1P00395 IGHV3-42-201ENST00000520410 361 ntBASIC16.52■□□□□ 0.24
MT-CO1P00395 AC027369.6-201ENST00000525520 931 ntBASIC16.52■□□□□ 0.24
MT-CO1P00395 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.52■□□□□ 0.24
MT-CO1P00395 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.52■□□□□ 0.24
MT-CO1P00395 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.52■□□□□ 0.24
MT-CO1P00395 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MT-CO1P00395 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-CO1P00395 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.52■□□□□ 0.24
MT-CO1P00395 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-CO1P00395 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms