Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 AC087481.3-201ENST00000602886 1894 ntBASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.39
TRAV5A0A0B4J249 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRAV5A0A0B4J249 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
TRAV5A0A0B4J249 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TRAV5A0A0B4J249 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.39
TRAV5A0A0B4J249 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRAV5A0A0B4J249 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
TRAV5A0A0B4J249 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TRAV5A0A0B4J249 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms