Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 AL590627.1-203ENST00000421194 1026 ntBASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 AC092910.1-201ENST00000482027 1129 ntBASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 AC012640.2-201ENST00000561606 901 ntBASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 AL356488.2-201ENST00000602755 427 ntBASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 AC005593.1-201ENST00000624894 515 ntBASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 AL139011.1-202ENST00000642063 584 ntBASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 AC007292.2-201ENST00000593524 1812 ntBASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.58■□□□□ 0.08
AP4B1Q9Y6B7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 AC073621.1-201ENST00000392730 636 ntBASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 AC126755.1-201ENST00000525846 6405 ntBASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 IL9RP2-201ENST00000423948 1312 ntBASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 AC139749.1-202ENST00000617529 3139 ntBASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 AC243591.1-201ENST00000452967 1364 ntBASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4B1Q9Y6B7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms