Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 AC084018.2-201ENST00000613093 2607 ntBASIC16.97■□□□□ 0.31
CDH9Q9ULB4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 AC074044.1-201ENST00000609673 707 ntBASIC16.97■□□□□ 0.31
CDH9Q9ULB4 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.97■□□□□ 0.31
CDH9Q9ULB4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 AL118508.1-201ENST00000613502 2345 ntBASIC16.97■□□□□ 0.31
CDH9Q9ULB4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDH9Q9ULB4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 CYP2T1P-202ENST00000641596 2535 ntBASIC16.96■□□□□ 0.31
CDH9Q9ULB4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.96■□□□□ 0.31
CDH9Q9ULB4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 AC004233.3-201ENST00000607794 1269 ntBASIC16.96■□□□□ 0.31
CDH9Q9ULB4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 AC004461.2-201ENST00000629517 803 ntBASIC16.96■□□□□ 0.31
CDH9Q9ULB4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 REXO1L1P-202ENST00000608646 1974 ntBASIC16.96■□□□□ 0.31
CDH9Q9ULB4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDH9Q9ULB4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH9Q9ULB4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH9Q9ULB4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CDH9Q9ULB4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH9Q9ULB4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.96■□□□□ 0.3
CDH9Q9ULB4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.96■□□□□ 0.3
CDH9Q9ULB4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDH9Q9ULB4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.96■□□□□ 0.3
CDH9Q9ULB4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH9Q9ULB4 Z97205.2-201ENST00000564697 1639 ntBASIC16.96■□□□□ 0.3
CDH9Q9ULB4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDH9Q9ULB4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CDH9Q9ULB4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 CROCCP1-201ENST00000426910 5675 ntBASIC16.95■□□□□ 0.3
CDH9Q9ULB4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms