Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 AL391005.1-201ENST00000623953 2435 ntBASIC17.27■□□□□ 0.36
CNTN3Q9P232 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 DOC2GP-202ENST00000514950 1163 ntBASIC17.27■□□□□ 0.36
CNTN3Q9P232 AC092337.1-201ENST00000568699 1129 ntBASIC17.27■□□□□ 0.36
CNTN3Q9P232 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 SRD5A3P1-201ENST00000603021 949 ntBASIC17.27■□□□□ 0.36
CNTN3Q9P232 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 LINC02199-201ENST00000506655 2702 ntBASIC17.27■□□□□ 0.36
CNTN3Q9P232 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CNTN3Q9P232 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTN3Q9P232 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNTN3Q9P232 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTN3Q9P232 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTN3Q9P232 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTN3Q9P232 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNTN3Q9P232 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNTN3Q9P232 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.27■□□□□ 0.35
CNTN3Q9P232 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.27■□□□□ 0.35
CNTN3Q9P232 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTN3Q9P232 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTN3Q9P232 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTN3Q9P232 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CNTN3Q9P232 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNTN3Q9P232 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 AC015922.1-201ENST00000421102 1152 ntBASIC17.26■□□□□ 0.35
CNTN3Q9P232 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 GNAQP1-201ENST00000444815 1067 ntBASIC17.26■□□□□ 0.35
CNTN3Q9P232 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 AL132655.2-201ENST00000596276 594 ntBASIC17.26■□□□□ 0.35
CNTN3Q9P232 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 AL662844.4-201ENST00000606367 2838 ntBASIC17.26■□□□□ 0.35
CNTN3Q9P232 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTN3Q9P232 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CNTN3Q9P232 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CNTN3Q9P232 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTN3Q9P232 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CNTN3Q9P232 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTN3Q9P232 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTN3Q9P232 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTN3Q9P232 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTN3Q9P232 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTN3Q9P232 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTN3Q9P232 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTN3Q9P232 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTN3Q9P232 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTN3Q9P232 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTN3Q9P232 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTN3Q9P232 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms