Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 AL645728.1-201ENST00000366221 2101 ntBASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 TFP1-202ENST00000475455 1573 ntBASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 PTPRVP-205ENST00000641549 5067 ntBASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 AC110048.1-201ENST00000604293 2157 ntBASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms