Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 AL353779.1-201ENST00000434793 351 ntBASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 AC008738.7-201ENST00000609744 511 ntBASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF3Q9NR81 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.08■□□□□ 0.33
ARHGEF3Q9NR81 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF3Q9NR81 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.08■□□□□ 0.33
ARHGEF3Q9NR81 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.08■□□□□ 0.33
ARHGEF3Q9NR81 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.08■□□□□ 0.33
ARHGEF3Q9NR81 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF3Q9NR81 PKD1P5-201ENST00000532415 10291 ntBASIC17.08■□□□□ 0.33
ARHGEF3Q9NR81 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF3Q9NR81 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.08■□□□□ 0.33
ARHGEF3Q9NR81 AC092053.1-201ENST00000605787 1936 ntBASIC17.08■□□□□ 0.33
ARHGEF3Q9NR81 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 AL035456.1-201ENST00000456064 1369 ntBASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 GIMAP3P-201ENST00000495150 836 ntBASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 AC009407.1-201ENST00000568958 598 ntBASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 AC073389.1-201ENST00000595595 795 ntBASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ARHGEF3Q9NR81 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 AC126177.1-201ENST00000547829 2218 ntBASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 AC087499.5-201ENST00000452760 1342 ntBASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 AL353705.2-201ENST00000428243 662 ntBASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF3Q9NR81 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms