Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.04■□□□□ 0.32
CD248Q9HCU0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD248Q9HCU0 AL161645.1-201ENST00000622716 1255 ntBASIC17.04■□□□□ 0.32
CD248Q9HCU0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD248Q9HCU0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD248Q9HCU0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.04■□□□□ 0.32
CD248Q9HCU0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD248Q9HCU0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD248Q9HCU0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.04■□□□□ 0.32
CD248Q9HCU0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.04■□□□□ 0.32
CD248Q9HCU0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD248Q9HCU0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.04■□□□□ 0.32
CD248Q9HCU0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD248Q9HCU0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.04■□□□□ 0.32
CD248Q9HCU0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD248Q9HCU0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.04■□□□□ 0.32
CD248Q9HCU0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD248Q9HCU0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD248Q9HCU0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CD248Q9HCU0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD248Q9HCU0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD248Q9HCU0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD248Q9HCU0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD248Q9HCU0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD248Q9HCU0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD248Q9HCU0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.02■□□□□ 0.32
CD248Q9HCU0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 KRT18P32-201ENST00000424695 1287 ntBASIC17.02■□□□□ 0.32
CD248Q9HCU0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 AC067863.1-201ENST00000494933 530 ntBASIC17.02■□□□□ 0.32
CD248Q9HCU0 AC069262.1-201ENST00000539058 672 ntBASIC17.02■□□□□ 0.32
CD248Q9HCU0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD248Q9HCU0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.02■□□□□ 0.32
CD248Q9HCU0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD248Q9HCU0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD248Q9HCU0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD248Q9HCU0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CD248Q9HCU0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.02■□□□□ 0.31
CD248Q9HCU0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD248Q9HCU0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CD248Q9HCU0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD248Q9HCU0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD248Q9HCU0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CD248Q9HCU0 TOP3BP1-201ENST00000420768 1380 ntBASIC17.02■□□□□ 0.31
CD248Q9HCU0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CD248Q9HCU0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms