Protein–RNA interactions for Protein: Q9HBH1

PDF, Peptide deformylase, mitochondrial, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDFQ9HBH1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDFQ9HBH1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDFQ9HBH1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PDFQ9HBH1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
PDFQ9HBH1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PDFQ9HBH1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PDFQ9HBH1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.21■□□□□ 0.18
PDFQ9HBH1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDFQ9HBH1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDFQ9HBH1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 AP005117.1-202ENST00000581724 1908 ntBASIC16.2■□□□□ 0.18
PDFQ9HBH1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 AC044860.1-202ENST00000559481 777 ntBASIC16.2■□□□□ 0.18
PDFQ9HBH1 SPCS2P1-201ENST00000561636 679 ntBASIC16.2■□□□□ 0.18
PDFQ9HBH1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 AC008738.7-201ENST00000609744 511 ntBASIC16.2■□□□□ 0.18
PDFQ9HBH1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 AC022144.1-201ENST00000602255 1580 ntBASIC16.2■□□□□ 0.18
PDFQ9HBH1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PDFQ9HBH1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDFQ9HBH1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 TARDBPP1-201ENST00000442013 1203 ntBASIC16.19■□□□□ 0.18
PDFQ9HBH1 BCRP1-201ENST00000444246 691 ntBASIC16.19■□□□□ 0.18
PDFQ9HBH1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 UGT1A2P-201ENST00000454886 866 ntBASIC16.19■□□□□ 0.18
PDFQ9HBH1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 RNA5SP421-201ENST00000516864 134 ntBASIC16.19■□□□□ 0.18
PDFQ9HBH1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDFQ9HBH1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
PDFQ9HBH1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms