Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.25■□□□□ 0.19
NDNQ99608 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.25■□□□□ 0.19
NDNQ99608 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 AC112504.1-201ENST00000623415 1841 ntBASIC16.25■□□□□ 0.19
NDNQ99608 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NDNQ99608 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 AC093724.1-201ENST00000448659 1027 ntBASIC16.25■□□□□ 0.19
NDNQ99608 KRT18P34-201ENST00000488218 1270 ntBASIC16.25■□□□□ 0.19
NDNQ99608 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
NDNQ99608 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.25■□□□□ 0.19
NDNQ99608 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NDNQ99608 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.25■□□□□ 0.19
NDNQ99608 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
NDNQ99608 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.24■□□□□ 0.19
NDNQ99608 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.24■□□□□ 0.19
NDNQ99608 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NDNQ99608 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.24■□□□□ 0.19
NDNQ99608 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.24■□□□□ 0.19
NDNQ99608 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.24■□□□□ 0.19
NDNQ99608 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.24■□□□□ 0.19
NDNQ99608 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.24■□□□□ 0.19
NDNQ99608 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.24■□□□□ 0.19
NDNQ99608 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 AC069224.1-201ENST00000566372 1715 ntBASIC16.24■□□□□ 0.19
NDNQ99608 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 ZNF259P1-201ENST00000407656 1365 ntBASIC16.24■□□□□ 0.19
NDNQ99608 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.24■□□□□ 0.19
NDNQ99608 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NDNQ99608 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.24■□□□□ 0.19
NDNQ99608 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDNQ99608 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
NDNQ99608 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.23■□□□□ 0.19
NDNQ99608 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.23■□□□□ 0.19
NDNQ99608 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NDNQ99608 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.23■□□□□ 0.19
NDNQ99608 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NDNQ99608 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.23■□□□□ 0.19
NDNQ99608 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NDNQ99608 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.23■□□□□ 0.19
NDNQ99608 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.23■□□□□ 0.19
NDNQ99608 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.23■□□□□ 0.19
NDNQ99608 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms