Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 FAM86GP-201ENST00000448322 971 ntBASIC13.39□□□□□ -0.27
GAFA1Q96PS6 KLF2P3-201ENST00000451977 1087 ntBASIC13.39□□□□□ -0.27
GAFA1Q96PS6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 AC067863.1-201ENST00000494933 530 ntBASIC13.39□□□□□ -0.27
GAFA1Q96PS6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 AC051619.7-201ENST00000568314 623 ntBASIC13.39□□□□□ -0.27
GAFA1Q96PS6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GAFA1Q96PS6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 AC022188.1-201ENST00000620960 1664 ntBASIC13.37□□□□□ -0.27
GAFA1Q96PS6 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms