Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 LINC02199-201ENST00000506655 2702 ntBASIC16.64■□□□□ 0.25
HDAC11Q96DB2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.64■□□□□ 0.25
HDAC11Q96DB2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
HDAC11Q96DB2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 AC112504.1-201ENST00000623415 1841 ntBASIC16.63■□□□□ 0.25
HDAC11Q96DB2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 FAM220BP-201ENST00000377689 816 ntBASIC16.63■□□□□ 0.25
HDAC11Q96DB2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 CEND1P1-201ENST00000451006 455 ntBASIC16.63■□□□□ 0.25
HDAC11Q96DB2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 IGHV3-62-201ENST00000520057 340 ntBASIC16.63■□□□□ 0.25
HDAC11Q96DB2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 AC061975.2-201ENST00000581722 295 ntBASIC16.63■□□□□ 0.25
HDAC11Q96DB2 AC024267.1-201ENST00000582320 895 ntBASIC16.63■□□□□ 0.25
HDAC11Q96DB2 MIR4469-201ENST00000583919 79 ntBASIC16.63■□□□□ 0.25
HDAC11Q96DB2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 AC022145.2-201ENST00000598203 171 ntBASIC16.63■□□□□ 0.25
HDAC11Q96DB2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 AC105339.1-204ENST00000636249 355 ntBASIC16.63■□□□□ 0.25
HDAC11Q96DB2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 AC010491.1-201ENST00000563101 2797 ntBASIC16.63■□□□□ 0.25
HDAC11Q96DB2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC11Q96DB2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HDAC11Q96DB2 AC069335.1-201ENST00000489972 472 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms