Protein–RNA interactions for Protein: Q96AY2

EME1, Crossover junction endonuclease EME1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EME1Q96AY2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EME1Q96AY2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EME1Q96AY2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EME1Q96AY2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EME1Q96AY2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EME1Q96AY2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.3■□□□□ 0.04
EME1Q96AY2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
EME1Q96AY2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 AC013726.1-201ENST00000563747 2285 ntBASIC15.29■□□□□ 0.04
EME1Q96AY2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
EME1Q96AY2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.29■□□□□ 0.04
EME1Q96AY2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.29■□□□□ 0.04
EME1Q96AY2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 TSPY5P-201ENST00000426936 936 ntBASIC15.29■□□□□ 0.04
EME1Q96AY2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 HOMER2P1-201ENST00000455653 964 ntBASIC15.29■□□□□ 0.04
EME1Q96AY2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.29■□□□□ 0.04
EME1Q96AY2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
EME1Q96AY2 AC020765.3-201ENST00000613051 740 ntBASIC15.29■□□□□ 0.04
EME1Q96AY2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
EME1Q96AY2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.29■□□□□ 0.04
EME1Q96AY2 AC067750.1-201ENST00000608826 6545 ntBASIC15.29■□□□□ 0.04
EME1Q96AY2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.29■□□□□ 0.04
EME1Q96AY2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.29■□□□□ 0.04
EME1Q96AY2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 AC131009.4-201ENST00000624048 1740 ntBASIC15.29■□□□□ 0.04
EME1Q96AY2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EME1Q96AY2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.28■□□□□ 0.04
EME1Q96AY2 AC008677.1-201ENST00000519230 1561 ntBASIC15.28■□□□□ 0.04
EME1Q96AY2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.28■□□□□ 0.04
EME1Q96AY2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 AL390755.1-201ENST00000623716 2027 ntBASIC15.28■□□□□ 0.04
EME1Q96AY2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.28■□□□□ 0.04
EME1Q96AY2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
EME1Q96AY2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 AC090616.6-203ENST00000579186 1945 ntBASIC15.28■□□□□ 0.04
EME1Q96AY2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
EME1Q96AY2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.28■□□□□ 0.04
EME1Q96AY2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.28■□□□□ 0.04
EME1Q96AY2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.28■□□□□ 0.04
EME1Q96AY2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.28■□□□□ 0.04
EME1Q96AY2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.28■□□□□ 0.04
EME1Q96AY2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EME1Q96AY2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EME1Q96AY2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
EME1Q96AY2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms