Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 AC106028.4-201ENST00000614509 607 ntBASIC14.51□□□□□ -0.09
CPNE4Q96A23 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 PCDHB19P-201ENST00000570871 2371 ntBASIC14.5□□□□□ -0.09
CPNE4Q96A23 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.5□□□□□ -0.09
CPNE4Q96A23 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 AL139010.1-201ENST00000454878 894 ntBASIC14.5□□□□□ -0.09
CPNE4Q96A23 CYMP-203ENST00000474680 1263 ntBASIC14.5□□□□□ -0.09
CPNE4Q96A23 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 AC069120.2-201ENST00000524091 540 ntBASIC14.5□□□□□ -0.09
CPNE4Q96A23 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 AC105021.1-202ENST00000570572 669 ntBASIC14.5□□□□□ -0.09
CPNE4Q96A23 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 MTHFR-217ENST00000641820 1569 ntBASIC14.5□□□□□ -0.09
CPNE4Q96A23 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE4Q96A23 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CPNE4Q96A23 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms