Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SNX18-202ENST00000343017 3140 ntBASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 WASH6P-202ENST00000359512 1437 ntBASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 AC013268.4-201ENST00000637413 2228 ntBASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 NME2-201ENST00000393183 568 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 AC026396.1-201ENST00000419388 421 ntBASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 EHF-205ENST00000527935 557 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 AC105339.3-201ENST00000560043 636 ntBASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 AL356488.2-201ENST00000602755 427 ntBASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 AL109954.1-202ENST00000564051 2148 ntBASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01561Q8N1V8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 TNRC18P2-201ENST00000417666 2714 ntBASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 PRAL-201ENST00000624952 3286 ntBASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms