Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 KRT223P-202ENST00000449164 1292 ntBASIC21.53■■□□□ 1.04
NME9Q86XW9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.53■■□□□ 1.04
NME9Q86XW9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.53■■□□□ 1.04
NME9Q86XW9 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.53■■□□□ 1.04
NME9Q86XW9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.53■■□□□ 1.04
NME9Q86XW9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NME9Q86XW9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
NME9Q86XW9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
NME9Q86XW9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.53■■□□□ 1.04
NME9Q86XW9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.53■■□□□ 1.04
NME9Q86XW9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.53■■□□□ 1.04
NME9Q86XW9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.53■■□□□ 1.04
NME9Q86XW9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.53■■□□□ 1.04
NME9Q86XW9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NME9Q86XW9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NME9Q86XW9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NME9Q86XW9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NME9Q86XW9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NME9Q86XW9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NME9Q86XW9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NME9Q86XW9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.52■■□□□ 1.04
NME9Q86XW9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.52■■□□□ 1.04
NME9Q86XW9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.52■■□□□ 1.04
NME9Q86XW9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.52■■□□□ 1.04
NME9Q86XW9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC21.52■■□□□ 1.04
NME9Q86XW9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NME9Q86XW9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC21.52■■□□□ 1.04
NME9Q86XW9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
NME9Q86XW9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
NME9Q86XW9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NME9Q86XW9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NME9Q86XW9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
NME9Q86XW9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NME9Q86XW9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
NME9Q86XW9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
NME9Q86XW9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NME9Q86XW9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NME9Q86XW9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NME9Q86XW9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NME9Q86XW9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NME9Q86XW9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NME9Q86XW9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 PDIA3P1-201ENST00000471856 1510 ntBASIC21.51■■□□□ 1.03
NME9Q86XW9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
NME9Q86XW9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NME9Q86XW9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC21.51■■□□□ 1.03
NME9Q86XW9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.51■■□□□ 1.03
NME9Q86XW9 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 ACTG1P3-201ENST00000431775 1114 ntBASIC21.51■■□□□ 1.03
NME9Q86XW9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.51■■□□□ 1.03
NME9Q86XW9 VDAC1P7-201ENST00000462417 847 ntBASIC21.51■■□□□ 1.03
NME9Q86XW9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.51■■□□□ 1.03
NME9Q86XW9 TDH-203ENST00000531764 1110 ntBASIC21.51■■□□□ 1.03
NME9Q86XW9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 AL049840.4-201ENST00000602422 811 ntBASIC21.51■■□□□ 1.03
NME9Q86XW9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC21.51■■□□□ 1.03
NME9Q86XW9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.51■■□□□ 1.03
NME9Q86XW9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 INTS4P2-202ENST00000614726 2019 ntBASIC21.51■■□□□ 1.03
NME9Q86XW9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.51■■□□□ 1.03
NME9Q86XW9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.51■■□□□ 1.03
NME9Q86XW9 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.51■■□□□ 1.03
NME9Q86XW9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NME9Q86XW9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 AC092364.2-201ENST00000596710 2692 ntBASIC21.51■■□□□ 1.03
NME9Q86XW9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NME9Q86XW9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.5■■□□□ 1.03
NME9Q86XW9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NME9Q86XW9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NME9Q86XW9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
NME9Q86XW9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
NME9Q86XW9 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
NME9Q86XW9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.5■■□□□ 1.03
NME9Q86XW9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NME9Q86XW9 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.5■■□□□ 1.03
NME9Q86XW9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.5■■□□□ 1.03
NME9Q86XW9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms