Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP4Q6PIL6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AC006277.1-201ENST00000624348 1610 ntBASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 ECEL1P2-202ENST00000465689 757 ntBASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AC024243.1-201ENST00000609234 778 ntBASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP4Q6PIL6 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP4Q6PIL6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms