Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 KRT18P31-201ENST00000506277 1292 ntBASIC15.07■□□□□ 0
RFX4Q33E94 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFX4Q33E94 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RFX4Q33E94 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.07■□□□□ 0
RFX4Q33E94 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
RFX4Q33E94 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.07■□□□□ 0
RFX4Q33E94 AC008608.2-201ENST00000606089 416 ntBASIC15.07■□□□□ 0
RFX4Q33E94 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.07■□□□□ 0
RFX4Q33E94 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.07■□□□□ 0
RFX4Q33E94 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.07■□□□□ 0
RFX4Q33E94 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX4Q33E94 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.07■□□□□ 0
RFX4Q33E94 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFX4Q33E94 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX4Q33E94 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.07■□□□□ 0
RFX4Q33E94 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFX4Q33E94 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.07■□□□□ 0
RFX4Q33E94 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX4Q33E94 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RFX4Q33E94 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RFX4Q33E94 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.06■□□□□ 0
RFX4Q33E94 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.06■□□□□ 0
RFX4Q33E94 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.06■□□□□ 0
RFX4Q33E94 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.06■□□□□ 0
RFX4Q33E94 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.06■□□□□ 0
RFX4Q33E94 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.06■□□□□ 0
RFX4Q33E94 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.06■□□□□ 0
RFX4Q33E94 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.06■□□□□ 0
RFX4Q33E94 PMS2P1-201ENST00000431037 1228 ntBASIC15.06■□□□□ 0
RFX4Q33E94 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.06■□□□□ 0
RFX4Q33E94 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.06■□□□□ 0
RFX4Q33E94 SLC25A6P2-201ENST00000497974 877 ntBASIC15.06■□□□□ 0
RFX4Q33E94 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.06■□□□□ 0
RFX4Q33E94 AC087641.1-201ENST00000557561 1021 ntBASIC15.06■□□□□ 0
RFX4Q33E94 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.06■□□□□ 0
RFX4Q33E94 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.06■□□□□ 0
RFX4Q33E94 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.06■□□□□ 0
RFX4Q33E94 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.06■□□□□ 0
RFX4Q33E94 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.06■□□□□ 0
RFX4Q33E94 AL805961.1-202ENST00000641562 540 ntBASIC15.06■□□□□ 0
RFX4Q33E94 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RFX4Q33E94 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
RFX4Q33E94 AC097376.2-205ENST00000610159 5334 ntBASIC15.06■□□□□ 0
RFX4Q33E94 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.06■□□□□ 0
RFX4Q33E94 AL353732.1-201ENST00000569618 1459 ntBASIC15.06■□□□□ 0
RFX4Q33E94 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RFX4Q33E94 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.06■□□□□ 0
RFX4Q33E94 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX4Q33E94 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.06■□□□□ 0
RFX4Q33E94 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.06■□□□□ 0
RFX4Q33E94 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RFX4Q33E94 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFX4Q33E94 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
RFX4Q33E94 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFX4Q33E94 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
RFX4Q33E94 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RFX4Q33E94 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.05■□□□□ 0
RFX4Q33E94 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.05■□□□□ 0
RFX4Q33E94 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
RFX4Q33E94 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
RFX4Q33E94 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFX4Q33E94 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.05■□□□□ 0
RFX4Q33E94 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFX4Q33E94 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.05■□□□□ 0
RFX4Q33E94 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.05■□□□□ 0
RFX4Q33E94 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.05■□□□□ 0
RFX4Q33E94 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.05■□□□□ 0
RFX4Q33E94 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.05■□□□□ -0
RFX4Q33E94 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.05■□□□□ -0
RFX4Q33E94 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.05■□□□□ -0
RFX4Q33E94 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.05■□□□□ -0
RFX4Q33E94 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms