Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH17Q12864 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.31■□□□□ 0.2
CDH17Q12864 AC079140.1-201ENST00000508039 487 ntBASIC16.31■□□□□ 0.2
CDH17Q12864 KRT8P48-201ENST00000515599 1220 ntBASIC16.31■□□□□ 0.2
CDH17Q12864 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.31■□□□□ 0.2
CDH17Q12864 IGHV3-62-201ENST00000520057 340 ntBASIC16.31■□□□□ 0.2
CDH17Q12864 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH17Q12864 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.31■□□□□ 0.2
CDH17Q12864 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH17Q12864 KRT8P23-201ENST00000560090 1207 ntBASIC16.31■□□□□ 0.2
CDH17Q12864 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.31■□□□□ 0.2
CDH17Q12864 AP000842.3-202ENST00000569238 1080 ntBASIC16.31■□□□□ 0.2
CDH17Q12864 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.31■□□□□ 0.2
CDH17Q12864 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH17Q12864 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CDH17Q12864 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.31■□□□□ 0.2
CDH17Q12864 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH17Q12864 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH17Q12864 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CDH17Q12864 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH17Q12864 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDH17Q12864 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDH17Q12864 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH17Q12864 AC134407.2-201ENST00000625089 1978 ntBASIC16.31■□□□□ 0.2
CDH17Q12864 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH17Q12864 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH17Q12864 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDH17Q12864 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDH17Q12864 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 AP003680.1-201ENST00000598970 3660 ntBASIC16.3■□□□□ 0.2
CDH17Q12864 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH17Q12864 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDH17Q12864 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH17Q12864 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH17Q12864 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 RNA5SP410-201ENST00000516285 106 ntBASIC16.3■□□□□ 0.2
CDH17Q12864 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH17Q12864 AC243562.2-201ENST00000561247 970 ntBASIC16.3■□□□□ 0.2
CDH17Q12864 LINC01225-203ENST00000563550 1244 ntBASIC16.3■□□□□ 0.2
CDH17Q12864 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.3■□□□□ 0.2
CDH17Q12864 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
CDH17Q12864 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH17Q12864 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH17Q12864 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH17Q12864 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDH17Q12864 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH17Q12864 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH17Q12864 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH17Q12864 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
CDH17Q12864 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH17Q12864 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH17Q12864 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH17Q12864 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH17Q12864 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH17Q12864 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH17Q12864 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH17Q12864 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH17Q12864 HTR5BP-201ENST00000430851 1154 ntBASIC16.29■□□□□ 0.2
CDH17Q12864 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms