Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 AC138969.2-201ENST00000532739 9932 ntBASIC12.44□□□□□ -0.42
HIST1H1AQ02539 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 MRPL20P1-201ENST00000400819 433 ntBASIC12.44□□□□□ -0.42
HIST1H1AQ02539 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 AL121912.1-201ENST00000603683 238 ntBASIC12.44□□□□□ -0.42
HIST1H1AQ02539 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 GGT4P-201ENST00000623672 1708 ntBASIC12.44□□□□□ -0.42
HIST1H1AQ02539 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 AP002414.3-201ENST00000589352 1468 ntBASIC12.44□□□□□ -0.42
HIST1H1AQ02539 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 PCGF3-213ENST00000620529 1899 ntBASIC12.44□□□□□ -0.42
HIST1H1AQ02539 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 AC006449.6-201ENST00000612330 2296 ntBASIC12.44□□□□□ -0.42
HIST1H1AQ02539 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H1AQ02539 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 KRT18P67-201ENST00000432816 1264 ntBASIC12.43□□□□□ -0.42
HIST1H1AQ02539 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.43□□□□□ -0.42
HIST1H1AQ02539 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 GPAA1P2-202ENST00000606848 1787 ntBASIC12.43□□□□□ -0.42
HIST1H1AQ02539 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms