Protein–RNA interactions for Protein: P82279

CRB1, Protein crumbs homolog 1, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRB1P82279 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.12■□□□□ 0.97
CRB1P82279 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CRB1P82279 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.12■□□□□ 0.97
CRB1P82279 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CRB1P82279 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.12■□□□□ 0.97
CRB1P82279 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CRB1P82279 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC21.12■□□□□ 0.97
CRB1P82279 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC21.12■□□□□ 0.97
CRB1P82279 SLED1-202ENST00000512051 380 ntBASIC21.12■□□□□ 0.97
CRB1P82279 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21.12■□□□□ 0.97
CRB1P82279 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.12■□□□□ 0.97
CRB1P82279 RETN-203ENST00000629642 400 ntTSL 5 BASIC21.12■□□□□ 0.97
CRB1P82279 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.12■□□□□ 0.97
CRB1P82279 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRB1P82279 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.12■□□□□ 0.97
CRB1P82279 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.12■□□□□ 0.97
CRB1P82279 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CRB1P82279 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.11■□□□□ 0.97
CRB1P82279 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.11■□□□□ 0.97
CRB1P82279 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 AC009053.2-201ENST00000563701 2365 ntBASIC21.11■□□□□ 0.97
CRB1P82279 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CRB1P82279 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC21.11■□□□□ 0.97
CRB1P82279 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.11■□□□□ 0.97
CRB1P82279 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC21.11■□□□□ 0.97
CRB1P82279 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
CRB1P82279 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CRB1P82279 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CRB1P82279 AC093433.1-201ENST00000458048 571 ntBASIC21.11■□□□□ 0.97
CRB1P82279 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CRB1P82279 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC21.11■□□□□ 0.97
CRB1P82279 AC091271.1-201ENST00000611877 1162 ntBASIC21.11■□□□□ 0.97
CRB1P82279 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC21.11■□□□□ 0.97
CRB1P82279 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.11■□□□□ 0.97
CRB1P82279 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.11■□□□□ 0.97
CRB1P82279 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CRB1P82279 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.11■□□□□ 0.97
CRB1P82279 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRB1P82279 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CRB1P82279 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRB1P82279 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
CRB1P82279 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
CRB1P82279 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRB1P82279 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CRB1P82279 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CRB1P82279 AC020916.1-201ENST00000587762 1774 ntBASIC21.1■□□□□ 0.97
CRB1P82279 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRB1P82279 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRB1P82279 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CRB1P82279 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.1■□□□□ 0.97
CRB1P82279 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRB1P82279 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRB1P82279 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC21.1■□□□□ 0.97
CRB1P82279 AL118558.3-201ENST00000607414 1079 ntBASIC21.1■□□□□ 0.97
CRB1P82279 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CRB1P82279 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRB1P82279 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CRB1P82279 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CRB1P82279 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.1■□□□□ 0.97
CRB1P82279 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
CRB1P82279 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRB1P82279 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CRB1P82279 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRB1P82279 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC21.09■□□□□ 0.97
CRB1P82279 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CRB1P82279 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.09■□□□□ 0.97
CRB1P82279 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CRB1P82279 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRB1P82279 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC21.09■□□□□ 0.97
CRB1P82279 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CRB1P82279 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRB1P82279 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.09■□□□□ 0.97
CRB1P82279 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms